Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906827.1_cds_XP_016457005.1_50779
CDS Infomation

[gene=LOC107780903] [db_xref=GeneID:107780903] [protein=calcium-dependent protein kinase 13-like] [protein_id=XP_016457005.1] [location=complement(join(16778..16927,17020..17250,18427..18594,18679..18794,19709..19861,19995..20138,26692..27322))] [gbkey=CDS]
Sequence

ATGGGGAACTGCTGTAGATCTCCGGAAGCTGTAGCTAGAGAAGATGTAAAGTCATCTAAC
TACTCCGGCAACGATCACGGCCGGAAAGAGAAGTCCGGCAACAAGCAGAAGCAGAAGCAG
ATCACTGTGTTAACTGATATAAAGAAGGAGAATATCGAGGAGAGGTATATAATTGATAGA
GAATTAGGCAGGGGTGAATTTGGAGTGACTTACCTTTGCATCGATCGTAGCAGTAGAGAC
GAATTGGCTTGCAAGTCGATTTCGAAGAGGAAGCTGAGGACGGCTGTGGATGTGGAGGAT
GTAAGGCGAGAAGTGGCAATTATGAAGCATTTGCCAAGGGATTCGAGTATAGTGAGGTTA
AAGGAGGCGTGTGAGGATGAGAATGCGGTGCATTTGGTTATGGAGTTGTGTGAGGGTGGG
GAGCTGTTTGATAGGATCGTGGCTCGGGGGCATTACACGGAGCGAGCTGCTGCTGCTGTC
ACGCGGACGATTATGGAGGTCGTGCAGCTCTGCCATAAGCATGGGGTGATCCATAGAGAC
TTGAAGCCTGAGAACTTTTTGTATGCTAATAAAAAGGAGAATTCACCTTTGAAAGCTATT
GATTTTGGATTATCGATTTTCTACAAGCCTGGTGAGAAGTTTTCTGAAATAGTAGGAAGC
CCTTATTATATGGCTCCAGAAGTGCTCAAGCGGAACTATGGACCAGAAATAGATATATGG
AGTGCAGGAGTCATTTTATATATTTTGTTATGTGGGGTTCCTCCATTTTGGGCCGAATCT
GAACAAGGAGTTGCCCAGGCCATCTTACGCGGGGCAATAGATTTCAAACGTGAGCCCTGG
CCAAGTATTTCAGACAGTGCTAAGAATCTTGTACGGCAAATGCTGGAGCCAGATCCAAAG
CTACGACTGACTGCAAAAGAAGTACTTGAACATCATTGGCTTCTAAATGCTAAGAAGGCT
CCAAATGTTCCTCTTGGGGATATGGTTAAGTCAAGACTTAAGCAGTTTGCACTGATGAAT
AGGTTTAAGAGGAAAGCTCTCAGGGTGATTGCTGATTTCTTGTCTAATGAAGAAGTTGAA
GACCTCAAAGAAATGTTTAGCAAGATTGATACTGATAATGATGGTATTGTTTCTATTGAA
GAACTGAAAGCTGGACTTCACAAGGTCAATTCACAGCTGGCGGAATCTGAAGTGAAGATG
CTTATTGAAGCTATTGATACTAACGGGAAAGGGACTCTGGACTATGGCGAATTTATTGCT
ATTTCACTCCATCTTCAAAGGATGGCAAATGATGAACATCTGCACAGAGCTTTCTCCTTC
TTTGACAAGGATAAAAATGGTTATATCGAACCAGACGAGCTTCGGGATGCATTGATGGAG
GACGGATCAGAGGACTGTACCAATGTTGCTAATGACATATTCCTGGAAGTTGATACGGAC
AAGGATGGCCGCATCAGCTATGATGAATTTGCAGCCATGATGAAAACTGGGACAGATTGG
AGAAAGGCTTCTCGACATTACTCAAGAGGGAGATTTAATAGTCTGAGTGTGAAGCTAATG
AAGGATGGTTCACTTAACTTGGGGAATGAGTAA

Peptide Sequence

PEP ID

XP_016457005.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 13-like [Nicotiana tabacum]
Sequence

MGNCCRSPEAVAREDVKSSNYSGNDHGRKEKSGNKQKQKQITVLTDIKKENIEERYIIDR
ELGRGEFGVTYLCIDRSSRDELACKSISKRKLRTAVDVEDVRREVAIMKHLPRDSSIVRL
KEACEDENAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIMEVVQLCHKHGVIHRD
LKPENFLYANKKENSPLKAIDFGLSIFYKPGEKFSEIVGSPYYMAPEVLKRNYGPEIDIW
SAGVILYILLCGVPPFWAESEQGVAQAILRGAIDFKREPWPSISDSAKNLVRQMLEPDPK
LRLTAKEVLEHHWLLNAKKAPNVPLGDMVKSRLKQFALMNRFKRKALRVIADFLSNEEVE
DLKEMFSKIDTDNDGIVSIEELKAGLHKVNSQLAESEVKMLIEAIDTNGKGTLDYGEFIA
ISLHLQRMANDEHLHRAFSFFDKDKNGYIEPDELRDALMEDGSEDCTNVANDIFLEVDTD
KDGRISYDEFAAMMKTGTDWRKASRHYSRGRFNSLSVKLMKDGSLNLGNE

Transcript Sequence

Gene sequence data has not been registered.